rs26967279 SNP Detail

Summary

• ID
  rs26967279
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:46084093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTCAGCAT GGCACCTATA
  TACATTAAGC ATCCTCACGT ATTAGTTTCC AGTCTTTCCT CTCAAAACTA CTTCTGTGTG
  TGGTGTGCAT CTGTAGATGC CTGCGTCGCT TGTGGTCCCA CTCACGTGTA AAAGTGTGTG
  CAAATGCAGG CTGGGAGTTG ATATCGTGAA GACTCTCCAG CCTTCAGTCC CTTAATCAAC
  R
  CCAGAGCTCA GTGGCATAGT AGACTCGCTA GCTGCCTTGC TCTGGGGTTC CTCTGTTCCA
  CCTTCAGAGG CAGGAGCTAT GGATGATGAG CTGTCTGCAC CTGGTATTTA TGTGGGTTCC
  TGGGGATCTG AACGCTAGGC CTCATGCTTG GCTCAGCAAA TGTTTTAACC ACAGAAACCT
  CCTAAGCCCC AAATAGTTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss37224821	NES08453749	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs26967279					SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37224821	NES08453749	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:46084093 () rs orientation: forward

Symbol	Name	Function Class
Cyfip2	cytoplasmic FMR1 interacting protein 2	584 bp downstream
Gm35624	predicted gene, 35624	within coordinates