rs26955244 SNP Detail

Summary

• ID
  rs26955244
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:62737227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATACACATT ATCTAGGGGT
  TGATATTACC TTGTAGCTTT TGCCATCCTC TGGGGTCTTA GAACACATCT TCGATGAATA
  AATGGAGAAT CTAGCAGTGG TGACAGTGAC AACAGAGAGA CAGTGTGTAG TGAGGGCTTA
  CACTGCCCTA ACTTACACTG TGCTATGATA CGCAGTCTTT TTGGCGTTGT GTGCACAGTG
  Y
  CTCAGTTCCC ACCCATCCTA AGTACTGTGT GTACAGCGTC TCACTTCATC CTCTGTGAAG
  CAGAAAGCAT CCCCATCTCC ACTTTCAGAC AAGGAAACTG AAGAACATTA AACAACCTGC
  TGGTGTTCGT AGAGCAATGG GCAGCTGGGC TGGGGCCCAG ACTCAGAAGC CATACCCCAG
  ACTTCACAGT CTTCATTACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss37186763	NES08417144	PERLEGEN	MM_PANEL2	f	SNP	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs26955244					SNP	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37186763	NES08417144	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:62737227 () rs orientation: forward

Symbol	Name	Function Class
Fbxw10	F-box and WD-40 domain protein 10	668 bp upstream
Rr386163	regulatory region 386163	within coordinates
Rr448938	regulatory region 448938	525 bp proximal
Tssr102067	transcription start site region 102067	661 bp upstream
Tssr102068	transcription start site region 102068	689 bp upstream
Tssr102069	transcription start site region 102069	710 bp upstream