rs26955243 SNP Detail

Summary

• ID
  rs26955243
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:62737436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACCCATCC TAAGTACTGT
  GTGTACAGCG TCTCACTTCA TCCTCTGTGA AGCAGAAAGC ATCCCCATCT CCACTTTCAG
  ACAAGGAAAC TGAAGAACAT TAAACAACCT GCTGGTGTTC GTAGAGCAAT GGGCAGCTGG
  GCTGGGGCCC AGACTCAGAA GCCATACCCC AGACTTCACA GTCTTCATTA CAAAGCTATG
  K
  TGAGACCTTC TGCTACATGG GTAGGCAGCT GACTGTGTCT ACACAACAAG TCAACTCCCA
  ACATATCCTC AGGACAACTG AAAATTCTGC ACCAGAGAGT GGTTCCCTGT GGATTCACAG
  CTAGCCCTGA ATAATTAAAT AATTTACATT ATTGTTAAGA CAGGTGCTTT TACTGTGGCG
  ATAACCAGAG ACTGAATATA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss37186762	NES08417140	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	T	G	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs26955243					SNP	G	G	G	G	T	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37186762	NES08417140	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:62737436 () rs orientation: forward

Symbol	Name	Function Class
Fbxw10	F-box and WD-40 domain protein 10	459 bp upstream
Rr386163	regulatory region 386163	within coordinates
Rr448938	regulatory region 448938	316 bp proximal
Tssr102067	transcription start site region 102067	452 bp upstream
Tssr102068	transcription start site region 102068	480 bp upstream
Tssr102069	transcription start site region 102069	501 bp upstream