rs26912604 SNP Detail

Summary

• ID
  rs26912604
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:45051933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCAGTATA ATAGACTCAA
  ATGAGGAAGT GCATGCTAAG ACTCGGAAGA TGCATTGCAC ATGTCCATGG AGTGAAAGAG
  GACAGATCGC GGTTTAGAGC TGAGCTCAGT GGCGCTTTTG GTAAGAAGCA AACTAGTCAA
  TATTGGGGGA GGGAGGGTGT TCTGCTCAGC CACACAGGCT CTGCCATAGC GCTTCAGCTC
  M
  GCCCACACAG TGAGAAAACT GCCACACTCC GTGTGTAAGC AAATGAGTGT GAATGAGTCC
  AGTCAGCTTT GCTTATGGTT ATGAAACATG CTGAACCTGG TGTGTGTGGA CCCTGGTTTA
  GAATGTATGG TTCTTGGCCA TTTCATGAGT TATCTACAAG AAAAAAGCTG CGGCCATAAG
  GACAGAAGGC TGTGTGGACT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37124031	NES08331917	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26912604					SNP	C	C	C	C	C	C	C	C	C	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37124031	NES08331917	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:45051933 () rs orientation: forward

Symbol	Name	Function Class
Gm12160	predicted gene 12160	within coordinates
Rr445733	regulatory region 445733	153 bp distal
Rr445734	regulatory region 445734	within coordinates