rs26892334 SNP Detail

Summary

• ID
  rs26892334
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:67146215 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCT CTTGAAAAGA CGAAGCAGCG
  R
  CTTCAGAATG AAGTGGAGGA CCTCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37172556	NES08484454	PERLEGEN	MM_PANEL2	f	SNP	A			G	A	A	A	G	A	A	A	G	A	A	G	A
ss132326647	ENSMUSSNP6348259	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26892334					SNP	A	A	G	G	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37172556	NES08484454	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67146215 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	Coding-Synonymous
Rr449442	regulatory region 449442	1403 bp distal
Tssr3528	transcription start site region 3528	646 bp downstream
Tssr3529	transcription start site region 3529	590 bp downstream
Tssr102201	transcription start site region 102201	1871 bp downstream
Tssr102202	transcription start site region 102202	1382 bp downstream
Tssr102203	transcription start site region 102203	1319 bp downstream
Tssr102204	transcription start site region 102204	923 bp downstream
Tssr102205	transcription start site region 102205	706 bp downstream
Tssr102206	transcription start site region 102206	602 bp downstream
Tssr102207	transcription start site region 102207	32 bp upstream
Tssr102208	transcription start site region 102208	202 bp upstream
Tssr102209	transcription start site region 102209	237 bp upstream
Tssr102210	transcription start site region 102210	255 bp upstream
Tssr102211	transcription start site region 102211	265 bp upstream
Tssr102212	transcription start site region 102212	287 bp upstream
Tssr102213	transcription start site region 102213	439 bp upstream
Tssr102214	transcription start site region 102214	795 bp upstream
Tssr102215	transcription start site region 102215	809 bp upstream
Tssr102216	transcription start site region 102216	853 bp upstream
Tssr102217	transcription start site region 102217	1007 bp upstream
Tssr102218	transcription start site region 102218	1718 bp upstream
Tssr102219	transcription start site region 102219	1805 bp upstream
Tssr102220	transcription start site region 102220	1844 bp upstream
Tssr108536	transcription start site region 108536	1335 bp upstream
Tssr108537	transcription start site region 108537	1314 bp upstream
Tssr108538	transcription start site region 108538	804 bp upstream
Tssr108539	transcription start site region 108539	606 bp upstream
Tssr108540	transcription start site region 108540	548 bp upstream
Tssr108541	transcription start site region 108541	46 bp downstream
Tssr108542	transcription start site region 108542	207 bp downstream
Tssr108543	transcription start site region 108543	322 bp downstream
Tssr108544	transcription start site region 108544	905 bp downstream
Tssr108545	transcription start site region 108545	1837 bp downstream