rs266157229 SNP Detail

Summary

• ID
  rs266157229
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52786488 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAGCTGCC TTAGCTCTTT
  AAACGTATTA GTATGAAACA ATTAAAACAC CTTCACCAAG CGCAGTTTGT TTTGTAGGAA
  GAACGATGGA GCTGATGACC GGTTATCTGG CTCCTGAGTC CTGGTTCAGC ATTTAACCAG
  CGCTGTGATT TTTCTTTTTC TTGAAGTTTC CGGTGTTAGC GTTCTCATGG GACAACATTA
  R
  ATTAGGTTGC CTTCTGGGTA CCTGCCTGTT GTGTGGGACT GTCTTCGAAG CCAAGCAGCC
  ACCATCTTGG GGAGCTAGGG TATCCCAGCT GGGTTTGTTA GCTGTTTAGA CATCATCATG
  GATGGGTAGG GAGGGTCACT AGGTATTACC ACCTAGTACC ATCTGCTGTA TGAAACTTTG
  GTCTCAGGGA GAAGCTAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765655	CHEV_3_52682989	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs266157229					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52786488 () rs orientation: forward

Symbol	Name	Function Class
Rr576595	regulatory region 576595	249 bp distal
Rr576596	regulatory region 576596	669 bp proximal