rs265953449 SNP Detail

Summary

• ID
  rs265953449
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165839084 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttgtaactg aactgaatct ccagcccATT
  AAGGCCTTCA TTATCTTTTT TTTTCCCTTA TGATATAGAC CAGAGTAGCT TCCAACTTGG
  TTCTGCAGGT CCTTCCCCTA TTTTGTGTGT GTGGTCTAGC ACTAACGCCt tttttttttt
  W
  aaatatttat ttatttattt tatgtatgtg agtacactgt agctgtcttc acacaccaga
  agaaggcttc agatcccatt acagatagtt gtgagccacc atgtggttgc tgggaattga
  attcgggacc tctggaggag cagtcagtgc                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320609302	CHEV_2_165822664	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265953449					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165839084 () rs orientation: forward

Symbol	Name	Function Class
Ncoa3	nuclear receptor coactivator 3	Intron
Rr570101	regulatory region 570101	683 bp distal
Rr570102	regulatory region 570102	270 bp proximal
Tssr21752	transcription start site region 21752	224 bp upstream