rs265945146 SNP Detail

Summary

• ID
  rs265945146
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136024546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATTGGAAG ACATGATCAC
  AACTCTTGCT TGGGCTTCAC CACAGCCTCT GCAGCTGCTG CCTCTCAGTA GCTCCTGATG
  GAGATGCCCA TACCATCCTT CACAGACCCT TCTCCTCTAG ACCCCATGGC TTCTCCTGCA
  ATTTCCTAAG GTAGTCATTG CCCAGTTAGC CCAGCTGGAA GCTTGCATAT TATCCTTGTC
  Y
  CATGCTCTCT GAAGCTCCGG CACCCTCCAC CCCCTCCGTC TCCTCAATCA GTGACAACTG
  CCAATTGCAT AGCTATTTAG TCCTATCTGT GTTACCTTTA AACCTTTCCC AAGTCTAGCA
  ACCTTTTCCC CTACTTACAT GGTTTACCAA ATGACTTAGA GCAATTACTT AGCGCCTCTT
  TTCTTTGAGT TCTATGAGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CZECHII/EiJ	MA/MyJ	RIIIS/J	SPRET/EiJ
ss363388179	MGP_WTSI_4_135853150	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CZECHII/EiJ	MA/MyJ	RIIIS/J	SPRET/EiJ
rs265945146					SNP	T	T	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss363388179	MGP_WTSI_4_135853150	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136024546 () rs orientation: forward

Symbol	Name	Function Class
Rr602345	regulatory region 602345	390 bp distal