rs265836973 SNP Detail

Summary

• ID
  rs265836973
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:145813697 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGCAAAAC ATGTTTTTCT
  CATTTTCATC AGAATGTGTG ATCCATGCCA TTTGAAATCA AATCCCCAAC ACAATGAGCC
  ATTAGTGTAA TAGCTCATTA CTAACAGCGG TCTTATAAAT AATACATTCT TATCATGCAC
  ATGCAGCTCG CCATGAAGCC AGCAAAAGGT ATTTCAGGCC ATGCAAGTTT CGCTGCGCCA
  R
  CACGGCTGTA GATTAGAAGG ACATCTCCAT GTGAACCAAG ATGGATGCCA ATTTTCCCTG
  CCGGGAGTGA GGCTGGCCGT CTCTTTCTGC ACATATGGTA GATGGATTGG TTAATCAGCG
  TCTGCTGAGT CTTGGGCCTG AAATTATAGA GAAGCCAGAC AAGTGCAGCT ACACAGCCTT
  TGTTCAGGAG TACAAACAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320539192	CHEV_2_145797513	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265836973					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:145813697 () rs orientation: forward

Symbol	Name	Function Class
Cfap61	cilia and flagella associated protein 61	Intron
Rr374013	regulatory region 374013	within coordinates
Rr566617	regulatory region 566617	656 bp distal
Rr566618	regulatory region 566618	within coordinates