rs265779118 SNP Detail

Summary

• ID
  rs265779118
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:165343858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGCTTAAA TTCTATCTGT
  CATGGCCATA TAATCTCTAA TGCCTAGGCT GGCCAGGACT CCTGGGGGCT GGAATCATTC
  ACAGAGCCTG GCTTTGAGAT GACCCAGATG CTAGGACTAT ATATCGAGGC ATATAGATAG
  ATAGATAGAT AGATAGATAG ATAGATAGAT AGATAGATAG ATAGATAGAT ATAGTGTTAT
  R
  TAGTGTTACA TATATTGTCA GTGTGGGCTT CCTCACAGCA GGGCTGGCAG CTGGACTTTG
  TCATCGTCAG CTGTATGAGA CAGGGTCTCC CTGAGTAGTC TAAGCTGCCC TCAATCCTCC
  TACTTCAGCT TCTCAGTTGC CAGCTTTATG GATGTGTGCC ACCAATCCCA GTTCAGTCAG
  ACTCACCTTG AGGGTCAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320608180	CHEV_2_165327438	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265779118					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165343858 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12710	CpG island 12710	1654 bp proximal
Rr569936	regulatory region 569936	1359 bp proximal
Rr569937	regulatory region 569937	1860 bp proximal
Slc2a10	solute carrier family 2 (facilitated glucose transporter), member 10	1959 bp upstream
Tssr21725	transcription start site region 21725	1956 bp upstream