rs265616942 SNP Detail

Summary

• ID
  rs265616942
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141407396 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAGCTAAC TTCCTATTAA
  GAACATAAGA TTTGATCTCT CCCTTATCAC AGCACAAAAC GTGCAACAGA AAACCTAAGA
  AACATCTAGA AACCATTTTT GGTATACAGG ATGCAGAAAC TCCTATCTGG GGAAACCTAA
  TGTTTGAAGA AGGTAAGAGT GAATCAGAGT GGTGAGGAGC CAAGGACCAC ACCAGGCGGC
  G
  GTCCTCTCAG GAGGGCTGCC CTCTAACCTC CCCCTCCCGT ACTCCCAAGA TGTGATGCTT
  CCGCTGGTCA AAAAAAGTAA GGCACGAAAG AAAAGCAAGA ACATCAAAGG CTCACCCCAA
  GTCCTGACTG CGGCTCAGTG CAAGCCCTGA GGGGATGCAG GAAACACCAA ATGCTATTGT
  GTTAACTACC GAGAGGGAAA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321388954	CHEV_4_141236000	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265616942					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141407396 () rs orientation: forward

Symbol	Name	Function Class
Rr377311	regulatory region 377311	within coordinates
Rr603857	regulatory region 603857	740 bp distal
Rr603858	regulatory region 603858	1708 bp proximal
Tssr44357	transcription start site region 44357	534 bp upstream