rs265462200 SNP Detail

Summary

• ID
  rs265462200
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:154107511 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGATG GAGCACTGGC CAAAGGAATC
  R
  GGGCACAAAG CCCAACCTGG GGGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321438231	CHEV_4_153397163	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265462200					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154107511 () rs orientation: forward

Symbol	Name	Function Class
Lrrc47	leucine rich repeat containing 47	1542 bp downstream
Rr606054	regulatory region 606054	1976 bp distal
Rr606055	regulatory region 606055	1291 bp proximal
Smim1	small integral membrane protein 1	mRNA-UTR
Tssr44852	transcription start site region 44852	711 bp downstream
Tssr44853	transcription start site region 44853	733 bp downstream