rs265399359 SNP Detail

Summary

• ID
  rs265399359
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:125221804 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTGTTTT GTATCAAGAT
  AAAGTTTAGA AACAGTATAT TTCTGAGAGA TTTAGAAGTT AGTCAATGAA TGATATAAGT
  AGGGAAACTT ATTTATTTGC AAGATTATAG AATTTGATCC TTTGAAACAC AGTCACAAAG
  TTAACTCCTG TTTCAAAGTT GTTTGCCTTT GTTGTGTTGG GGATTTATAT AAACACCATA
  W
  CGTTCTTGCA AAAAATTCAA AGACAGAAAT AAGCAATATG TTGGTGACCA CACTCCTAAA
  TCTCTCTGAA GAGAATGGAG TCATATATGA AAATAGAAAA ATAAACTTTG CTAAGGATCC
  CATTTTTTAA TGTTAAAACT GAAGATCTGA TGTGCTCTTT CTCTCTATAA GAAATAATGG
  CATTTGAATT GGAATCTTAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320936366	CHEV_3_125131073	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265399359					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125221804 () rs orientation: forward

Symbol	Name	Function Class
Ndst4	N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	Intron
Rr584610	regulatory region 584610	1957 bp distal