rs265397139 SNP Detail

Summary

• ID
  rs265397139
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13288592 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTACTGAAAA CATGCAGGTA
  CACGAGATGA GTTTGATCTG TGCCTTCTCA GAGTTAACAG CTAGTGTGCA GGAGAGATGA
  GTAAGCTGGG AAGACAGTTC AGAATGGAGA GGTCAGATGG GAGATGCTCA AGATACCATG
  GGGATCCAGA GAATGGGAGG CTAATCAACA CCTGGGCAAT CAAGGAAAGT ATATAAATGA
  Y
  TGGTGCTGTG CAAGCATATG CCCTGGGAGT GATTTCACCA CCTAGTTATG CTCAAACACC
  TTGTGGATCA GGGATTTGTG AAGAGCACGC TGAGGTCAGT TCTCTGATGC AGTGTCTGGG
  ATCTCTGCCA AAAACATTCA AGTGGCTGGG AAATGGAATT GTGGGAGGTG TCCCAACTCA
  CAAGTCTGGC ACCTGGGCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321747522	CHEV_6_13238593	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265397139					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13288592 () rs orientation: forward

Symbol	Name	Function Class
Rr626565	regulatory region 626565	1545 bp distal
Rr626566	regulatory region 626566	within coordinates