rs265177418 SNP Detail

Summary

• ID
  rs265177418
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106716641 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGA ACCTGGGGGG GGGGGGGGGG
  R
  ACGACAAAAA AAAAAAACAA CAAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321247423	CHEV_4_106532049	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265177418					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106716641 () rs orientation: forward

Symbol	Name	Function Class
Gm12746	predicted gene 12746	926 bp upstream
Gm69780	predicted gene, 69780	within coordinates
Gm70282	predicted gene, 70282	397 bp upstream
Rr376973	regulatory region 376973	within coordinates
Rr596849	regulatory region 596849	158 bp proximal
Rr596850	regulatory region 596850	408 bp proximal
Tssr38192	transcription start site region 38192	277 bp upstream
Tssr42651	transcription start site region 42651	55 bp upstream
Tssr42652	transcription start site region 42652	143 bp downstream
Tssr42653	transcription start site region 42653	154 bp downstream