rs265102309 SNP Detail

Summary

• ID
  rs265102309
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:105806120 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTAAGATAG TTGACTCAGA TTCTGGCCTT TACCCATCGT
  AGTTGACTGT AACTGTCCTC CCTCCCTCCC TCCCTCCCTC CCTCCCTCCC TCCCTCCCTC
  T
  CTCCCTCCCT TCTTTAAGTT ACCTTTGTTC AAGATTTTGT CAAAGAAATC TGAGAAGTAA
  CTAATGCAGG TTCAGATCCC AGCTCCGCCA CTTGCTCCC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320863591	CHEV_3_105701722	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265102309					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105806120 () rs orientation: forward

Symbol	Name	Function Class
Rr397920	regulatory region 397920	1045 bp upstream
Rr582806	regulatory region 582806	80 bp proximal
Rr582807	regulatory region 582807	733 bp proximal
Rr582808	regulatory region 582808	1165 bp proximal
Rr582809	regulatory region 582809	1546 bp proximal
Tmigd3	transmembrane and immunoglobulin domain containing 3	Intron