rs264979546 SNP Detail

Summary

• ID
  rs264979546
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:66084947 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTC CTAATGTAGC TCAGGCTGGC
  C
  CAAACCTGCT CTCCTCCTGA CTCTT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320323718	CHEV_2_66092660	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264979546					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:66084947 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11703	CpG island 11703	1631 bp proximal
Rr397014	regulatory region 397014	1886 bp upstream
Rr558173	regulatory region 558173	1155 bp proximal
Rr558174	regulatory region 558174	1792 bp proximal
Rr558175	regulatory region 558175	1979 bp proximal
Tssr24377	transcription start site region 24377	1973 bp downstream
Ttc21b	tetratricopeptide repeat domain 21B	Intron