rs264896551 SNP Detail

Summary

• ID
  rs264896551
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108235962 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTCTTTGC TGACCTTCAG
  AGCTTCTCTC TTCCTGTGAT TTTTGCAGTC TTCCTCCTGC GACTCCAAGG GCTCACTTCC
  CTCCATTTGT TATGTACACT GCTGGGGAGA TCTCCAGATC CCAGGTTGGT TTTTGTAAAC
  AATCCTGGAG AACTAAGAAC CATGCAAATG CTCTCTAGTT TTAGGATATC TTTTTTTTTT
  W
  AATTTCTCAT TTTTGCTATC TAGTTTGAAC TTTCCTATTT CACATAATCT ATTCTTGTTT
  ACTAAGTCTA TCCTATGATC ATTAGAGAAA TTAATTTTGT ATATATTTTT ATTTCAAAAA
  AATTACATTT TTGTCTTCTC CAGATGTTGA TCATTCTTGT TCCTCCATGC TTTAAGCCTT
  CACTTTATTT TCTGTTCCAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321892259	CHEV_6_108208995	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264896551					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108235962 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636067	regulatory region 636067	747 bp proximal
Tssr58057	transcription start site region 58057	1086 bp downstream