rs264887617 SNP Detail

Summary

• ID
  rs264887617
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:141307136 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGACCCAGG GCGGGATTCT TATTTGAGTG
  CTGTCATTTG CCTCTAAACA GAAGGCCATG GTCTCTCGTG TTCAGAGGGA ATGTGATGCC
  CCAGATCTGC TCAATAATTG CCCTGATTTC TGCCTAAGGG TTGACTTTCT TCTAGCTAAA
  Y
  GTTGTTTCCC CTAACACTCT CCCCCATTGC TAACAAAGTG GCTCTTTCAT TCCACCCTGG
  GCGGTACAGC ATCTTTCACT CTCTCTGTGC ATGAGCTCTG AGGCTGATTC AGCATCACAG
  ACTTCCTTTG TGGCCATCTC TGTAGTCTTT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320993695	CHEV_3_141264339	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264887617					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141307136 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr586341	regulatory region 586341			within coordinates
Unc5c	unc-5 netrin receptor C			Intron
				Noncoding-Transcript-Variant