rs264763939 SNP Detail

Summary

• ID
  rs264763939
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:78502766 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATA TATTTTTTCT CTCTCTCTCT
  S
  TGAGTGTGGC TAATGTCACA CTCCT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320807544	CHEV_3_78399381	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264763939					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:78502766 () rs orientation: forward

Symbol	Name	Function Class
Gm65533	predicted gene, 65533	513 bp upstream
Rr578423	regulatory region 578423	524 bp distal
Rr578424	regulatory region 578424	97 bp distal
Tssr33603	transcription start site region 33603	1094 bp upstream
Tssr33604	transcription start site region 33604	1040 bp upstream
Tssr33605	transcription start site region 33605	1025 bp upstream
Tssr33606	transcription start site region 33606	1010 bp upstream
Tssr33607	transcription start site region 33607	937 bp upstream
Tssr33608	transcription start site region 33608	842 bp upstream