rs264734526 SNP Detail

Summary

• ID
  rs264734526
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165346439 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGCCAGCC AGCAGGTCGC
  TGAGCACCTC AGTGCTCGGT ATTGCCCTAG GGGCAGGGCA CTGACAGGGA CAGATTAAGA
  TGGAACTCCT GGGCTGGATT TGACTTCAGT GAGAGGAGAC AGGTCCACTA ATGCAGAGTT
  CCAGCCAGGA GGACAGGGGG TCAAGATTTC TGTTATCTTT TCTGGATTCA GAAACTTAAA
  T
  GCCTTTAGCA TAGTCAGTTT CTCATTCTTC AGTGGGCATG AGGTTCAGAG CACGCGCAGG
  GAGGGGCTGG GACACACAGT GAAGAAAGAG ACTCTGCTCT CAGTCTCGGA GGTGAGAAGC
  TGGGGACCAG GTAATGAACA GGAGCTGTGG CACACACAGG GGTACGAAGG CCAGGAGGTA
  TGTTCCTCTG GTAGCAAAGG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J
ss356457667	MGP_WTSI_2_165330019	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J
rs264734526					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss356457667	MGP_WTSI_2_165330019	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165346439 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12710	CpG island 12710	420 bp distal
Rr569936	regulatory region 569936	722 bp distal
Rr569937	regulatory region 569937	within coordinates
Slc2a10	solute carrier family 2 (facilitated glucose transporter), member 10	Intron
Tssr21725	transcription start site region 21725	606 bp downstream