rs264566573 SNP Detail

Summary

• ID
  rs264566573
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113580191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    catgggcct agcattcaaa cttttattca
  ggccagacct attcaaacca ccacaCATGG ACTGACTAGA CCATTGTTTG GACAAGCCtt
  cttctgcctt agtctcttga gtgctgaaat tataagcatg tacgactacg ttcCTTTAAC
  R
  ATTTTTTTTT AATGAAACGA TTAGGTAAAA AGGTTGGAGA TTATTTTTGC AGTTCTTGAT
  AGAAATGGAA TGAGTTTACA CTGTGACTTA CCATTTTGCT TCAGCCGGTC CATCATTGGG
  TATTAGCATT AAAAATGTAT TTGGCagctt                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321911094	CHEV_6_113553224	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264566573					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113580191 () rs orientation: forward

Symbol	Name	Function Class
Brk1	BRICK1, SCAR/WAVE actin-nucleating complex subunit	1542 bp upstream
Cpgi17850	CpG island 17850	1145 bp proximal
Gm67049	predicted gene, 67049	within coordinates
Rr379958	regulatory region 379958	1851 bp downstream
Rr636549	regulatory region 636549	1052 bp proximal
Rr636550	regulatory region 636550	1276 bp proximal
Rr636551	regulatory region 636551	1495 bp proximal
Tssr58230	transcription start site region 58230	1519 bp upstream