rs264430679 SNP Detail

Summary

• ID
  rs264430679
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:9095516 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATATCCTA TTCTTTCAAA
  TCTTTCTCTG ATGTGTCACT TTGTCTGCCT CCCAATTAGA CATCACTTTC ATATGTAGGT
  GCTTCCGTCT ACAAATTAAC TTTACCTTCA TTATTTTGGA TTAAAGGTGT GTATTAAGTG
  TGTGTCTTTA TTTAAGCCAG AGGGATTAAA TTCTGTGCTG AGGGCATGTC TGTATTACAG
  Y
  CAGAGTGGTG GCCATATTGC AGGAATCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT
  CTCTCTCTCT CTCCACCTCC ACCTCTCCCT ATCCTCCTCA TCTATCTATC TATATATTTG
  GGCATATATA TATATAAGTT TACTACTGAG GCATCATTAA TATTGTGGCC CTAGTCACAA
  ATTGCTGTTG GAGAGCAAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321738840	CHEV_6_9045516	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264430679					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:9095516 () rs orientation: forward

Symbol	Name	Function Class
Nxph1	neurexophilin 1	Intron
Rr626465	regulatory region 626465	1847 bp proximal
Tssr54933	transcription start site region 54933	873 bp upstream