rs264337429 SNP Detail

Summary

• ID
  rs264337429
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137114485 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGCCGGAC ACAACAATGG
  ATGGATCATG TTGTCAGTAA ATTATGTACA CAGCTGGGCA GTGGTGGCGC ACACCTTTAA
  TCCCAGCACT TGGGAGGCAG AGGCAGGTGG ATTTCTGAGT TCGAGGCCAG CCTGGTCTAC
  AGAGTGAGTT CCAGGACAGC CAGGGCTACA CAGAGAAACC CTGACTTGAA AAAAAAAAAA
  M
  AAAAAACCAA CAACAACAAC AAAAAAGAAA TTATGCACAC TATAGAAGAA ATTATACACA
  CACTGAAGAA AAATACACAC TAGCACAAGT ATAACACATC CACAAACCAT ACCTGGAAGT
  TTATTAAATT AACTGTGCTT CTGAACACAC GACCGAGGAA GGAAATAATT TTCACTGTGT
  ATCTTTCTGG TTTGTTATTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321363475	CHEV_4_136943089	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264337429					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137114485 () rs orientation: forward

Symbol	Name	Function Class
2810405F17Rik	RIKEN cDNA 2810405F17 gene	85 bp downstream
Cpgi15128	CpG island 15128	636 bp proximal
Gm52681	predicted gene, 52681	1094 bp upstream
Gm69272	predicted gene, 69272	297 bp downstream
Rr377264	regulatory region 377264	501 bp upstream
Rr602608	regulatory region 602608	831 bp proximal
Rr602609	regulatory region 602609	1332 bp proximal
Rr602610	regulatory region 602610	1544 bp proximal
Tssr1346	transcription start site region 1346	1520 bp upstream
Tssr44122	transcription start site region 44122	961 bp downstream
Tssr44123	transcription start site region 44123	1197 bp downstream