rs264324244 SNP Detail

Summary

• ID
  rs264324244
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107136819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGATCCAA GGTGTAAACT
  CAAGCTATCA GACATGCATT CACACGCCTC TACTCATTGA CCTGTCCCGC CAGGCCTCCG
  CTTTGTTTAC AAAGCAGGAT TTCTCACTCT TACCTGGAGC TTGCTGATTC AGCTTGGCTG
  ACTGGCCAGC TAGCTAGCCC CAAGGGTCAG CCTGCCTCTG CATCCCCACC ACTGAGGCCA
  Y
  AGGCATTCAT CGTCACACCC AGCTGCTGTG GTTGTGTTTT GGGTTTTGTT TTTTTGTTTT
  TTTTTTTGGT TTTGTTTTTG TTTTTGTTTT TTAACATGGG AATCAAAATC TTGTCCCGCT
  TGCCCAGTCC AGGTAGACAA GACAAGCTAG GCTGGCAGCC ATGATGATAC TTGTTCAATA
  TGAAGTCCAC ACTCTACATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320864770	CHEV_3_107032421	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264324244					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107136819 () rs orientation: forward

Symbol	Name	Function Class
A630076J17Rik	RIKEN cDNA A630076J17 gene	1111 bp upstream
D3Tem2	DNA segment, Chr 3, Temple 2	1941 bp proximal
Rr582941	regulatory region 582941	within coordinates
Rr582942	regulatory region 582942	621 bp proximal
Rr582943	regulatory region 582943	1122 bp proximal
Tssr31190	transcription start site region 31190	953 bp upstream
Tssr31191	transcription start site region 31191	1105 bp upstream