rs264317331 SNP Detail

Summary

• ID
  rs264317331
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3186960 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              CTTGCCCCTG AGGAATCTGC
  AGACAATGAA TTTAGAAGCC TGGAGCTCCT GCTTGCTCTG TAGATCACCC CACCTAGCCT
  GTGCAGTGCA CTCCCTTACC CTGCCACCAC ACCCTGCCTC TCCTCACTCA CCCCGCCCAC
  CTGCCAGCCA TCCAGCCAAT CAGTTCCTGG CACTTCCCTT CTTTTTCCCA CTCTTTTCCC
  W
  TTCCTGTACT TTTCTTCCTG CCCTTCTCAG TTCCCTGGCC TCAGGAGCTT CACATGCTAG
  GGCACAAAAG ACACGTGCAG CTGAGTTCCT TCCTGCCCCA CTCTGCAAAG CACTGAGACT
  TGAGATAAGA GCCCAATCTG TAGGGCACAG GGACCAGGAC ACAGGGACCA GACTGCAGGG
  GCTGCGGAGC GGCTCTGAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CAST/EiJ	LEWES/EiJ	SPRET/EiJ
ss379340336	MGP_WTSI_10_7109581	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CAST/EiJ	LEWES/EiJ	SPRET/EiJ
rs264317331					SNP	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss379340336	MGP_WTSI_10_7109581	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3186960 () rs orientation: reverse

Symbol	Name	Function Class
Gm6667	predicted gene 6667	1927 bp upstream
Rr426787	regulatory region 426787	within coordinates