rs264122941 SNP Detail

Summary

• ID
  rs264122941
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148253275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGTGCTGGA GGCAGAGGCA GGTGGATCTC CATGAGTTTA
  AGACCAATGT GGTCTCTACA TAGTGAGCTC TAGGCCAGCC ATAGTTACAC AATAAGACCC
  K
  GTCTCAAAAC AAAACAAAAC AAAACAGAAA ACCACAACCC TCTCCCCCAG AAAACCCCAA
  ATCAAATATA GTAGCAAGAA AGGATAAAAA CTATCTTAA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321417776	CHEV_4_147542927	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264122941					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148253275 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15297	CpG island 15297	1830 bp distal
Cpgi15298	CpG island 15298	858 bp proximal
Gm68449	predicted gene, 68449	within coordinates
Rr604611	regulatory region 604611	1550 bp distal
Rr604612	regulatory region 604612	81 bp distal
Rr604613	regulatory region 604613	545 bp distal
Rr604614	regulatory region 604614	320 bp distal
Rr604615	regulatory region 604615	1897 bp proximal