rs264103341 SNP Detail

Summary

• ID
  rs264103341
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129188436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtgccacca cacccagctG AAGGGACATA
  TTTTAGCTCA AGGGAAGTCT GATGTCCTTC ttttctcctt ctgagacagg gtctctctgt
  gtagccctgg ctgtcctgga actcactctg tagaccaggc tgaactcaga cttccagatc
  Y
  acctgcctct gtttcctgag tgttgggact agaggtgggg cataccacac ccagATAGGT
  CTAATAATGT CTTTGGGGCT AGGGGTTACT TACCATCCAG TACTACAGAA AAACCTGTTC
  TTTGGGCCCA TTCATTCtat tattattatc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321311702	CHEV_4_128971887	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264103341					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129188436 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14888	CpG island 14888	484 bp distal
Rr600195	regulatory region 600195	581 bp proximal
Rr600196	regulatory region 600196	1262 bp proximal
Sync	syncoilin	Intron