rs263842298 SNP Detail

Summary

• ID
  rs263842298
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:58490500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cgctgCTTT AGGACAAAAC TCAAAGGTAT
  ACGAAACCCT GCTGTGTAGA GAAACCCTAA AGGAGCCTTG AATTCCACAG CCATAGACGG
  CCTCACAGGC CTTTAGATAA TTGGTCTTCA GCTGGTGGTG CTATTTTGGA GAGACTCTTA
  S
  GGACGTGAGA CTTAGCTGGC TCACATAGGG GTGGGGCTCA CATAGGACTG GAGCTCACAT
  AGGGGTGGGG CTCACATAGG GGTGGGGCTC ACATAGGGGT GGGGCCAGGA GTTGAAGGCC
  AGGTCAGCTA TAACTCTACT TCTCTAtgtg                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321138269	CHEV_4_58503372	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263842298					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58490500 () rs orientation: forward

Symbol	Name	Function Class
Lpar1	lysophosphatidic acid receptor 1	Intron
Rr592898	regulatory region 592898	within coordinates