rs263684527 SNP Detail

Summary

• ID
  rs263684527
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:22536859 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAAGAGGT TTCTCATGCC
  TAGTTACTGG GGTTTTTGTT GACTATTAAT ATAACTACAG TTGCAATTTT ATTTAAAGTC
  TATATTCATA AACATATATA AATATTATAT GTAAATCTAG ATAAATATAA AAATATGATT
  CCCTGTTTTG TTTTTTCAAA CATCCTTGGT GTTAGTGCCC CCCCTCTATT TTCTATACTC
  M
  TTCTAATAGT CAAAGCCCCC CTCTGTGTCT CTCATTTCCT TCTTCACAGC ATCTGCATAC
  TGCTATTCCT CTCTCTAGAG TCCCTTCTCC CATCCCATAA ACTATATTCT AAATGCTCAC
  TCTTGTGTAA CAAACTTTGA TTAGTCTAAA ACAGCTACAA GTTATGGGAT ATCCTTCCTA
  TATTTAGGTA TGCGGCTTCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321765804	CHEV_6_22486860	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263684527					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:22536859 () rs orientation: forward

Symbol	Name	Function Class
Rr627119	regulatory region 627119	549 bp proximal
Rr627120	regulatory region 627120	605 bp proximal