rs263640612 SNP Detail

Summary

• ID
  rs263640612
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:52890913 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCCTCCTGA GCCAGGGGCT GCATTTTACC
  CAGTGCTTGG CCATGAGGAA CAGAACAGTG CCCCACATAT AGATGTGCCT GCACTTAGAA
  TGGGCTTACA TCTGCTGAAA CAAGCTAAAA AAAAAATGAG CGAAGAAAAA TACATTTAAT
  S
  TCCAAAGAGT AGAGTCACGT AAAGGTTCAT CTCTTGAAGC AGTTTCTCTT GTGGGGCCTT
  GTAAGTGAAA CCCAAAAGAC CAGGCTGTTC TCCAAGACTT ACAAGCTCCC CAACACAGCA
  AAACGTTAGA GAGGACTTTA TAAATGAGCC                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320766330	CHEV_3_52787414	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263640612					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52890913 () rs orientation: forward

Symbol	Name	Function Class
Cog6	component of oligomeric golgi complex 6	Intron
Gm65168	predicted gene, 65168	within coordinates
Rr576615	regulatory region 576615	331 bp proximal
Rr576616	regulatory region 576616	1939 bp proximal