rs263618367 SNP Detail

Summary

• ID
  rs263618367
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140218554 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAGTGGGG ATTTAGAAGC
  TGGAGTGCAG GCACTCACTC CACAGACAGC GTCATATACT CAGAGAAGCT CAGCGCACAG
  CCAAGATCAC ACAGCAAGCT GCTGTCAGAA CCTCCCTGGA CGCCCCCCCC CACCCCCTGT
  CATCCATCAC AGTAAAGTCC TCGCTGGGAG CCTGTTATGC CTGTGCCCCC CCCACCCCCG
  S
  CCAGCACCCA CCCCCACCCC CGGCCAGCCA GGTTCAAGGC TTGCCCTGGT GCTTCAGGTG
  TGGGGCTTGC CTTGTCTTTT CTGTGCTCCT GGATGTAGTG TGGCAGCCTT CACAGCTGAA
  CCCACCTATA ACATTTTGAA GTCCCCCCCA CCCCCACACC TTGGTGAAGC CTCAATTTCT
  TCATCTTCAA AGAGATGAGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CAST/EiJ	CBA/J	CZECHII/EiJ	JF1/MsJ	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SM/J	SWR/J
ss363494762	MGP_WTSI_4_140047158	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	C	G	G	G	G	G	C	G	G	G	G	G	G	G	G	C	G	G	G	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CAST/EiJ	CBA/J	CZECHII/EiJ	JF1/MsJ	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SM/J	SWR/J
rs263618367					SNP	G	G	C	G	G	G	G	G	C	G	G	G	G	G	G	G	G	C	G	G	G	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss363494762	MGP_WTSI_4_140047158	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140218554 () rs orientation: forward

Symbol	Name	Function Class
Rr603445	regulatory region 603445	423 bp proximal