rs263588685 SNP Detail

Summary

• ID
  rs263588685
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132614544 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAATCCTTA GGTCACTGAT
  TCATAAACAC TTCACAGTAA GGAAGCATCC CCATTTTTAT CTTTAAACAT TTTTGGTCTG
  GTTTACTTTT TTATTTGTTT TTCCAAACAG GGTTTCTCTG TGTAACCCTG GCTGTCCTGG
  AACTTACTCT GTAGACCAAG CTGGCCTCGA ACTCAAAGAT CTACCTACCT CTTTGCTCTG
  Y
  CTCCCAAGTG CCAGGATTAA AAGTAATGGC ATTTTGGCTG GACAGTGGTG GCGCACAACT
  TTAATCCCAG CACTTGAAAG ACAGAGACAG GCAGAGCTCT GTGATTCAAG ACTACATAGC
  AAGTTCTGGG CCAGCCAGGA ATACACAGTG AGACCCTGTC TCAAACCAAA ACAAAGAGCC
  AGGAATAGTA GTACAAGTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337146	CHEV_4_132443148	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263588685					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132614544 () rs orientation: forward

Symbol	Name	Function Class
Gm13033	predicted gene 13033	817 bp downstream
Gm70413	predicted gene, 70413	1017 bp downstream
Rr601103	regulatory region 601103	1920 bp distal
Rr601104	regulatory region 601104	427 bp proximal
Rr601105	regulatory region 601105	611 bp proximal
Rr601106	regulatory region 601106	721 bp proximal