rs263393038 SNP Detail

Summary

• ID
  rs263393038
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100729249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCAGCTCC ACCTCAAAAG
  AAGTGTGTGC GTGTGTGTGC GTGTGTGTGT ATGTGTGTGT GTGTGTGTGT GTGTATGTGC
  ATGTGAGGGT CGTTGCTGTT GTTTACACCA GGTCAGCTGG CTGTGAGTTT CCAGAGATTC
  TCCAATCTCT CTCTCCCATC TCACTGCATC ACTGAGGATT CAGATACAAA TTGCTGTGTC
  Y
  GGCTTTACTT GAACTTCTGG GGGGAGGCGG TGTTAAATTC AGGTCCTTGC CCTTACACAG
  TGAACACTTT ACTCACTGAA CCATCTCACC AAGCCACTAA ATTATTTTAA TAAGTTTAAT
  AATTTAAGTA ATAAAATAAA TTTAATAATC AATTGGAAAC TAGTGGGAGC CTAGTCATAT
  TGGAGAGTAA AACGTATAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320849645	CHEV_3_100625856	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263393038					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100729249 () rs orientation: forward

Symbol	Name	Function Class
Gm32720	predicted gene, 32720	within coordinates
Rr581910	regulatory region 581910	1746 bp distal
Rr581912	regulatory region 581912	267 bp distal
Rr581913	regulatory region 581913	392 bp distal
Rr581914	regulatory region 581914	256 bp distal