rs263379220 SNP Detail

Summary

• ID
  rs263379220
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:102341330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCTACTAG AAAACTCATG
  GAAAAAAGTC TTAAGGGTTT TGCATACTTG GCCAGATGCT GATGTAAGTC CAGAGAGCAT
  TGATAGTCAT AACAGTGAGT GGCATCACAT GAGCACTGAC CAAAGCACTC AAGCTACAGA
  CTGCCTGGCA TCCCAAACAC TCACCTTTTG GTCTTGCCAA ACTTGCTGGA GTTTAAGACG
  G
  TGGCTGTATG GCCACTCTTT AAAGTATTCT GCTGGTTTAC TATGGAAAGG CTATGAACAT
  GTACACCAAA ATGAATAATA ATGATACCGT TTTACATGGA ATTTAGAAGT TCACTTGTAG
  GCTTTGGCTG ACCCCAGTTT CACCATTTAA GAACCTGCCC TCTTTGCCAT TAAGAAGAAT
  TCAGAAGGTT GGAGAGATGG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321233786	CHEV_4_102156738	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263379220					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102341330 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pde4b	phosphodiesterase 4B, cAMP specific			Intron
				Noncoding-Transcript-Variant
Rr596250	regulatory region 596250			436 bp distal
Rr596251	regulatory region 596251			756 bp proximal
Rr596252	regulatory region 596252			864 bp proximal
Rr596253	regulatory region 596253			1049 bp proximal