rs263194375 SNP Detail

Summary

• ID
  rs263194375
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:131858834 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAGTGAAC AGGGAGCTGG
  GCGTGGTGGC GCACGCCTTT AATTTCAGCA CTCGAGAGGC AGAGGCAGGC GGATTTCCTG
  CCTCTTTTAA GTACCAGGAC AGCCAGGGCT ATACAGAGAA ACCCTGTCTC GAAAAACAAA
  CAAACAAAAA GTGAACAGGG TTAGATAAAG CCAGGAGGAG TTTGAGGCTA TCCTGTTCTA
  M
  ATGGCAAGTT TTAGGGCAAC CAAGGCTACA TGATAAGACC CTGTCTCAAA AAAAAAAAAA
  AAAAAGTAGG TTTTTTTTTT TCCCCCTGGT CTATTCAACA CAAAACAATG TCCTCCCTTT
  TTATGGAGGT GGCTGATGAC ATCCATGGCT GAATCTCTGT CTGACCTGGA ATTCAGTAGC
  TGACCTAGGC CCAGCCTTAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321330903	CHEV_4_131687438	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263194375					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131858834 () rs orientation: forward

Symbol	Name	Function Class
Oprd1	opioid receptor, delta 1	Intron
Rr377201	regulatory region 377201	1596 bp downstream
Rr600880	regulatory region 600880	1725 bp distal
Rr600881	regulatory region 600881	804 bp proximal