rs263170159 SNP Detail

Summary

• ID
  rs263170159
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151865797 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACAAACAA ATCTAAAGCG
  CGTGTTTGTA TTCCGGCCAG AGAGATTAAA GGTGTGCGCT AAGGGCTGAG CCACATTATA
  ACTAGAAGCT GGTTTGGTTG TTTTTGTTTT CAGTAAACAA CACAATCTCT GGGTGCAACA
  CTACTCTTCG TTGCTGTGGC ATCTCTCCAT ATCAGGAGTT TGAACAGCTC TAGATGCTGT
  Y
  CTAGTCTTAC AGAATCTTAT TCTGGACATC TCCTGAAGTC ACGCAGCAAG TCAGGAACCC
  ATCTTTCTCC TCACCCCTCT CTGAAGCCTG GGAAGTAGAC TCAGGAATGC TCACAGTACC
  CTGGAATCAC TCACTACGCT GTGTCCCGGG CCCAGAGGAA GAAGGCTGCC AAGCACGAAG
  CTTTTCAACA CCTGATAGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320561837	CHEV_2_151849613	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263170159					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151865797 () rs orientation: forward

Symbol	Name	Function Class
Gm75398	predicted gene, 75398	within coordinates
Gm75402	predicted gene, 75402	within coordinates
Rr374074	regulatory region 374074	within coordinates
Rr567261	regulatory region 567261	1660 bp distal
Rr567262	regulatory region 567262	1464 bp distal
Rr567263	regulatory region 567263	527 bp proximal
Rr567264	regulatory region 567264	724 bp proximal