rs263066416 SNP Detail

Summary

• ID
  rs263066416
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137336770 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTAAAGGT GTGTGTGCTT GGTTATAGGC
  AGCACATGCC CCTCCCTCCA TGTTTCTGCT TTTTCTATAT TCTGAGAGCT CCCATCAGTG
  GAGTTGCTCT GACGAGTGTG ATAGACGAGC TTGGAGCACA CAACTTCCTG TCTTTTAAAC
  R
  GTGTTGAGTT TGCATTCTCT CTTGTACACA TTAGCAGTCG GAAGCCATTA ATCACATTGA
  GTTTATCCAT CTAAAGACGT CCTGAGTGTT CACTTAGTGT TGTATTCTTA GTGTTGTATT
  AAGCACGGTG GCAGTTGCGC TGACGGTATT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321365625	CHEV_4_137165374	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263066416					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137336770 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr602660	regulatory region 602660			92 bp proximal
Tssr39763	transcription start site region 39763			1212 bp upstream
Usp48	ubiquitin specific peptidase 48			Intron
				Noncoding-Transcript-Variant