rs263059434 SNP Detail

Summary

• ID
  rs263059434
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:117658568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTGTGGT TTTCATATGG
  TCTTAGGAGC TTTGTGTCAG TGTGTGGTTA CTGGAGGTGG TGGAACCCGA AGAAGGTTAG
  ATTTGCTGAG GGATGCTTAG GCTTAAATGA GTACTCATGG GATACAGACT TGGCTCATTC
  AAGAGAGTCT TTTATATAAA ACCATACTGA GGCCTCTCCT GGTCCCTCTG GCTTCCTTTT
  Y
  GGAAACGTGA TAGTTCCCTT GTTCCCTGTA CTCCACCCAG ATGAAGTACA GGAGGCCTTC
  TCCCCAGCTG AGCTGATAAT CATATCCCTG AGCCACTAGC ACCCTGTGAT AAGTAAAGTC
  CTTTTATTCA TAAAGTGATT TAGTCTTAGG TATTCCATTA GAGTAATAAA AAGGTTGAGT
  GTCTCAATAA TGATACTGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320900582	CHEV_3_117567837	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263059434					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117658568 () rs orientation: forward

Symbol	Name	Function Class
Gm52614	predicted gene, 52614	1881 bp downstream
Rr583873	regulatory region 583873	735 bp proximal
Rr583874	regulatory region 583874	1979 bp proximal
Snx7	sorting nexin 7	Intron