rs262964789 SNP Detail

Summary

• ID
  rs262964789
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152516098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTCTCAGA AGACATGCCA
  GTGCCTGTGG GGTCTTGGGT ACAGGCTGAC CCACCTCTCA AACAAAAGAA CAAATAGCAA
  TTGCCAACTT GTGGGACAGG CAGTCAGTAC CCTGAACACA ACCCAAGGTA CGTGAGCACT
  TGGAGAGGCC CCAGGACTGA GCTGGCATGC TCCCCCAAAA GGACAAACCT GTTGTGATGG
  A
  GTCTCCAAGG GGTTTTTTCT TAGAAGAGAT GACGTGTGGT GGGTTTTGAG AGGTGAAGCC
  TTAGAATAAG TCTTTAGCCT ATTGTGGACC AAGATGTAAG CTCTCAGCGA TCCCGCCTTT
  GCTCTGCCCT AGCTATGGAC TCTAATTGTC TGAAGCTCAA ATTTAACATT TTCTTTTGTA
  AGTTGCCTTG GTCATGTTGT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434656	CHEV_4_151805750	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262964789					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152516098 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D4Mit356	DNA Segment, Chr 4, Massachusetts Institute of Technology 356			1549 bp distal
Kcnab2	potassium voltage-gated channel, shaker-related subfamily, beta member 2			Intron
				Noncoding-Transcript-Variant
Rr605873	regulatory region 605873			745 bp proximal
Rr605874	regulatory region 605874			827 bp proximal
Rr605875	regulatory region 605875			874 bp proximal