rs262869668 SNP Detail

Summary

• ID
  rs262869668
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:107346708 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCCAGGTTC CCACCTCTCT
  CTCTTGGCTG CTTGGCTCAC TCTCTCCTGA GGCGTACTCA GAAGGGGCCG GCTTTCCTGA
  GACAGGCCAT TGTCTTGGAG GTGGCCCTGA TGCCACTCAG GCACTTTCAG AGCCATAGCA
  TCCCAGCCCC ATTGAAAGGT TGTCTAAGCC ATGTCGGTGA TATCACAAGA AGTATGGTGC
  R
  TCGGCCGTGG GCCGAGTTAA AAGCCGTAGA GCGACATGGT CCCAAGTGGA GCGTGTGATT
  AGGGAGACAG AGCTGATGCG GATCCAGGCA GAACCAGGCT TCCACGGCGT TGGCGCCAAT
  CGGGCTTTAT AGGCAGGCAG TGGCAGGGAA CACACAGCAC TTGCCAGCTT GGGTGATAAG
  GCTCTGGTGC TGGACTGGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321248462	CHEV_4_107162116	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262869668					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107346708 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14542	CpG island 14542	within coordinates
Glis1	GLIS family zinc finger 1	Intron
Rr597007	regulatory region 597007	within coordinates