rs262820245 SNP Detail

Summary

• ID
  rs262820245
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:105172750 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCACGTAG GAGTAGTCCA
  CTCACACCCC TCCCTTTCCT ATTCCGGTTC TGTGTGAGGC CAAACTTTTT CACACAGTTC
  AACCAAATAA CAAATCCCTA TGGACAGAAT TAACATGAGA TACCAGAATC TGTTTTGCTT
  GCTGGTTAGT CGGATCCTGG GCAGGGGATA TATAGACTTC AGTGGTAGAG CACTTGCTCA
  R
  AATGTGCAAG GCTCTGAGTT CAATCTGTAT TACTATAAGA AAGAAAAAGA AAAAATAGTC
  AGATGTTGAA GATATCTGTA AACACGTGAG ACGATGCAAT CTTTCTTAAG AATTTTTATG
  TAGTTTTTAA ATGTATAACT ATCATTTAGA TTGACATGTA ATAGATTAGT CATGTATAAT
  TTAATTAATA TATAATCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321243573	CHEV_4_104988158	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262820245					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:105172750 () rs orientation: forward

Symbol	Name	Function Class
Gm40217	predicted gene, 40217	within coordinates
Rr596594	regulatory region 596594	1861 bp distal
Rr596595	regulatory region 596595	115 bp distal
Rr596596	regulatory region 596596	1032 bp proximal
Rr596597	regulatory region 596597	1506 bp proximal