rs262767290 SNP Detail

Summary

• ID
  rs262767290
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:79527088 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTAATATAC ATGGGAGATT CCTTCCCTTG
  GAGAGTCCCT CGTGTGTGGG CAGGGTCTGG AGAGTCAGGA AGGGGAGCAT GAGCCGTCAT
  CAAACAGCAA AGAGGGAACT CAAATAGGGA AGCACTGCTT CCCCCTGTTC TCAGGACAAG
  R
  TCGGACAGCT TTGAAATGGG GTTGACTTAA CAACTGACAT ACAACCAGGA GGGCCTGCGA
  TCCAGACCCT AAATAAAGTT ATTTGTGTGA AAAGTTTCCT CAACTTGATC CTGCTCCTAA
  ATACCCAAGG ACAGCCTCTA TTTTCAAACA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320361096	CHEV_2_79536901	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262767290					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:79527088 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11846	CpG island 11846	536 bp distal
Rr560025	regulatory region 560025	431 bp distal
Rr560026	regulatory region 560026	1052 bp proximal
Rr560027	regulatory region 560027	1509 bp proximal