rs262660403 SNP Detail

Summary

• ID
  rs262660403
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156147514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCCAGAAAG CTCTGCATAG TAGTTCACTC
  TTTTAGCCTC AAAGTCGAGA GACAACCAAT TTTTTACAGC AGATTCAATA AAATGGCTCT
  ACCAGGCAGC TGGCAGAGCA TGAGATGGAG CCCTGCACAG AAGTACCTAT AGATGCTCCT
  Y
  TAGCTTTTGG TCCCAGATGG AAATGATCTG AAGTCGAGCT TTGGTCCGTT CTGGCCTAGG
  CCCTTTACAG AAGTTACGCT GAGTGTCTGA CAACCCTGTT TGTGAGTGTT CTCAGGGATT
  AAAGTTGTCT TTAAACAACC TGGACTGGCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321445026	CHEV_4_155437166	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262660403					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156147514 () rs orientation: forward

Symbol	Name	Function Class
Gm52714	predicted gene, 52714	1217 bp upstream
Rr377474	regulatory region 377474	831 bp upstream
Rr606657	regulatory region 606657	815 bp proximal
Rr606658	regulatory region 606658	1300 bp proximal
Tssr40789	transcription start site region 40789	1282 bp upstream