rs262642865 SNP Detail

Summary

• ID
  rs262642865
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:79312852 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAACATAT GTAAATGCAG
  GCTATGACTC ATACACATAA AGTTAAAACA AGTACATTTA AAAAATGTAC ATATGCTTAT
  GTTTCATCCT GTGCCTTATA TGATGTAATT TAGTAACTTA ACAGAGACAT CATCTACTCT
  TGCATAGTTT TCAAGTTTAC AGTGCAATTT TATTAATTGT AGCCTCTGTG ATGTATGGGA
  Y
  ATCTCTTTAA ATTATTTCTT CTATCTAACT AGGTTTTGTG TCATTTGACC AATAGACTCA
  CACACACAAT CTATACACAC ATTCAATATG TACAATCTAG TTGGCATTCT ATTTTTAGCA
  GTGGGAACCT TTCTACCTGA CTTTTGCAAG AAGATAATTG TTGCTAACTT TAGTCATGAT
  ATTGTAGGAT AGAACTCTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321834626	CHEV_6_79285863	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262642865					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:79312852 () rs orientation: forward

Symbol	Name	Function Class
Rr632524	regulatory region 632524	410 bp distal