rs262584360 SNP Detail

Summary

• ID
  rs262584360
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:142843626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTAGGCAG ACACTAGGTC
  ATGGGAGCAA AGTGAGGACC TTGGAGAGAG CAGGTGACGT AAAGGGACAG GAGCTCTCCA
  AGGCATGAGG GTGGCTGCTG GGTCTCTCTA CCTGGCTTTC ACCTGGCTCC TCTCTCTCTC
  TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TGGCACAGAT
  R
  ACATTGGGCC TCACACTGAT GCCTTACCTA TCTCTATAAA TTTGTGGCTC AGTTCACTGA
  CTGGCAATCA GTTCTGGAGC GGAGGTGGAG GGGAAGGCCA AAGGCGTGGA AGCTGGTGTC
  AAGGGAAGAC AAGCCTGAAA CCTCTGCTGA AATCCTCTGT GTACTGAGTG AAGAAGCCAC
  CAGACACCTC CAGCAATGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321402599	CHEV_4_142706959	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262584360					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142843626 () rs orientation: forward

Symbol	Name	Function Class
Prdm2	PR domain containing 2, with ZNF domain	Intron
Rr604158	regulatory region 604158	1711 bp proximal