rs262452204 SNP Detail

Summary

• ID
  rs262452204
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141926732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGGTCAGT GCTGTCCTCA
  TTGGCAAAAG ATCATGAACC AAGGAATGGT GCTCTGCTCC TGGAGCTGGA GAAGTACTAA
  ATCCTTCCCT CAGAGCCCCA GAAGCATCAA GGAGCCCCAC CAACACTTTG GTTCTAGTGA
  TGAAAATTCT CTTTGGACTC CTGCTCTGAT CACTAGGGCT AGAAGATAAT GACATTTATG
  Y
  CCCTCAAATA CAGAGTGACT GGATGGAGGT GGGGGTCTTG TCCTGCTCAC TGGGGATGTC
  AGTGTCTATG TATCTATGTG GGGTGGGTCA AGGCCATTGT GGTAGGAAGA AAAAGAAACA
  CTGTTATGGT CCTGTGGATG GATGTGAGAG ATGGGGGTGG TCTGCTTCAC TGTGTTCATG
  AAAGCGTGGA AGGCCTTGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320999380	CHEV_3_141883935	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262452204					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141926732 () rs orientation: forward

Symbol	Name	Function Class
Rr586397	regulatory region 586397	1619 bp proximal
Rr586398	regulatory region 586398	1876 bp proximal