rs262441322 SNP Detail

Summary

• ID
  rs262441322
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:98130252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATACATCA TACATGTATG
  TAAAAAACAT ATATGTGGTA CAGGATAACA TATAGGAAGG AAACCTACCA AGGGTGACAG
  GAGATGAAGA GGAACCAGGA GTCCTTTTAG AGGATAGGAA ATGTTTGTTT GTTTGTTTGT
  TTGTTTGTTC ATTTGTTTGA TTGTTTATAG TTTTAATTCT GCCATGGCTT GCTCTCTCTC
  T
  CTCTCTCTCC TACTTCCCCA TAGCTACAAA AAAGAATACA ATTGACAATG AAATGTATAA
  TTGCATAACC CTAAGCAAAA GTCCACAGTC TCCAAACAGC CATGCTAACC ATGAGGTGTC
  TAGAATTTGG ATTGGGCAAG GGTGTGTTTG AGCGGTGACC TTAGTTTTAT TTGTGTGTCC
  ACTAAAAGAG ATTTTTATGT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	BALB/cJ	C57BL/6J	JF1/MsJ	PL/J	SPRET/EiJ	ST/bJ	SWR/J
ss362539244	MGP_WTSI_4_97908706	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	BALB/cJ	C57BL/6J	JF1/MsJ	PL/J	SPRET/EiJ	ST/bJ	SWR/J
rs262441322					SNP	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss362539244	MGP_WTSI_4_97908706	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98130252 () rs orientation: forward

Symbol	Name	Function Class
Gm70434	predicted gene, 70434	within coordinates
Rr406792	regulatory region 406792	367 bp proximal
Rr595713	regulatory region 595713	1364 bp distal
Rr595714	regulatory region 595714	1249 bp proximal
Rr595715	regulatory region 595715	1680 bp proximal