rs262397734 SNP Detail

Summary

• ID
  rs262397734
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71008974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTCTTTTT ATTTATTATA
  TGTAAGTACA CTGTAGCTGT CTTCAGATCT CATTATGGGT GGTTGTGAGC CACCATGTGG
  TTGCTGGGAT TTGAACTCAG GACCTCTGGA AGATGCAGTC AGTGCTCTTA CCCGCTGAGC
  CATCTCACCA GCCCCGCATT GTATTTTCTT AATGATAGGC TCCATCATGG GTGGGATCAC
  Y
  CCTGGACTGG TGGTGCAGGG TTCTATAAGA AAGCAGGTTC AGCAAACTAT GGGGAGCAAG
  CCAGTAAGCA GCACCCCTCC AAGACTTCTG CATCAGCTCC TGCCTCCAGG TTCTTGCCCT
  GTTTAAGTTC CTGCCCTCAC TGCTTTTGAT GACGAACTGT TATGTGGAGG TAGAAGTAAA
  ATAAATTCAT TCCTCCCCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321816644	CHEV_6_70981984	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262397734					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71008974 () rs orientation: forward

Symbol	Name	Function Class
Rr631870	regulatory region 631870	1179 bp distal
Rr631871	regulatory region 631871	1245 bp distal