rs262093091 SNP Detail

Summary

• ID
  rs262093091
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127742876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGCTTTAT TATTTTCAAA GCCACAGCAC
  CACCTACTGG CATATTGAAG AACAGTTCTG TATGTTAGAT GGAGgagaga gagagagaga
  gagagagaga gagagagaga gagagagaga gagagagaga gagagagaga gagagagaga
  K
  ACTCCTGATG TCTTGGTACT TCTCTGTCCC CTCAAGCAAT GACATCCGCT CTTGTAGACA
  TTCTGACATG TCCTGTTTCC ATTCAAACTA AGTGTTTCTC TGTTTATTGC TTAGTTTGTC
  TTTCTCCTGT TGCTTGAACG GGATATGTGC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320958550	CHEV_3_127652145	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262093091					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127742876 () rs orientation: forward

Symbol	Name	Function Class
9830132P13Rik	RIKEN cDNA 9830132P13 gene	within coordinates
Rr398010	regulatory region 398010	within coordinates
Rr584909	regulatory region 584909	607 bp distal
Rr584910	regulatory region 584910	within coordinates
Rr584911	regulatory region 584911	106 bp distal
Tssr31619	transcription start site region 31619	1076 bp upstream